| | Libros de texto recomendados= * elemental ** avanzado |
| | Albert, V. A. (ed.) 2005. Parsimony, Phylogeny, and Genomics . Oxford. 229 p.(Acceso a la Tabla de Contenido  y CHAPTER 1 Parsimony and phylogenetics in the genomic age. Victor A. Albert.  ) |
| ** | De Salle, R., Giribet, G. & Wheeler, W. 2002. Techniques in Molecular Systematics and Evolution . Birkhäuser. Basel. 450 p. [book review ] |
| | Felsenstein, J. 2004. Inferring Phylogenies. Sinnauer Associates Inc. Massachusetts. 664 p. |
| * | Kitching I. J. , Forey P. L., Humphries Ch. J . & Williams D. M. 1998. Cladistics: Theory and Practice of Parsimony Analysis (The Systematics Association Special , No 11) , 2nd edition, Oxford. 228 p. |
| | Lemey P, M. Salemi, & AM Vandamme (eds). 2009. The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing Cambridge University Press; 2nd edition. 736 pp. |
| | Nielsen, R. 2005. Statistical Methods in Molecular Evolution (Statistics for Biology and Health) . Springer, New York, 528 pp. |
| | Paradis, E. 2006. Analysis of Phylogenetics and Evolution with R (Use R) . Springer. New York. 211 pp. |
| ** | Salemi M & AM Vandamme. 2003. The phylogenetic handbook. A practical approach to DNA and Protein Phylogeny. Cambridge University Press. 406 p. |
| * | Schuh, R. T. 2000. Biological Systematics: Principles and Applications (Comstock Books) . Cornell University Press. 236 p. |
| | Semple, C. & Steel M. 2003. Phylogenetics. Oxford Lecture Series in Mathematics and its applicatioons. Oxford University Press, 239 p. |
| | Wagner, GP. (ed.). 2001. The character concept in evolutionary biology. Academic Press. 624 p. |
| | Wheeler, W.C. , L. Aagesen, C. P. Arango, J. Faivovich, T. Grant, C. D'Haese, D. Janies, W. L. Smith, A. Varón, and G. Giribet. 2006. "Dynamic homology and phylogenetic systematics: A unified approach using POY". American Museum of Natural History, New York. 365 pp. |
| | Wiens J. J. 2000. Phylogenetic Analysis of Morphological Data. Smithsonian Institution Press. 220 p. |
| | Wiley E. O. 1981. Phylogenetics: the theory and practice of phylogenetic systematics. Wiley-Interscience. 439 p. |
| | Wiley E. O., Siegel-Causey D., Brooks D. R. & Funk V. A. 1991. The compleat cladist: a primer of phylogenetic procedures. Lawrance Kansas. 158 p. ( aprox 56 kb) |
| | Williams, D. M. & M. C. Ebach. 2007. Foundations of Systematics and Biogeography Springer. 310 pp. 
|
| | Yang, Z. 2006. Computational Molecular Evolution (Oxford Series in Ecology and Evolution). Oxford University Press, 380 pp. |
